BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB036G05LP1|AL430279
(869 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1806 1704 0.0
3x_Contig63 1157 0.0
3x_Contig33 540 e-153
3x_Contig1015 153 6e-37
>3x_Contig1806
Length = 53694
Score = 1704 bits (859), Expect = 0.0
Identities = 867/869 (99%), Gaps = 1/869 (0%)
Strand = Plus / Plus
Query: 1 tcctgtcgagttcccatgattacaaaawgctaaagctctcattcaatgcttggtacggag 60
||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||
Sbjct: 52043 tcctgtcgagttcccatgattacaaaaagctaaagctctcattcaa-gcttggtacggag 52101
Query: 61 gtaatgagttgggcaatgctattgctgatgtcttgtatggtgacgttattccaagtggta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 52102 gtaatgagttgggcaatgctattgctgatgtcttgtatggtgacgttattccaagtggta 52161
Query: 121 aattatctctctcatggccaataaaccttgaagataacccaacttatttgaacttcaaga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 52162 aattatctctctcatggccaataaaccttgaagataacccaacttatttgaacttcaaga 52221
Query: 181 ctgaatttggcagagttctctacggtgaggatattttcattggatacagattctatgaga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 52222 ctgaatttggcagagttctctacggtgaggatattttcattggatacagattctatgaga 52281
Query: 241 agttgcaaagaagagttgcattccccttcggttacgggttatcttatactgaatttgctt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 52282 agttgcaaagaagagttgcattccccttcggttacgggttatcttatactgaatttgctt 52341
Query: 301 tatctaatctacaagtacaaacggatgaggaggttatctctgtttctgttaatgtaaaga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 52342 tatctaatctacaagtacaaacggatgaggaggttatctctgtttctgttaatgtaaaga 52401
Query: 361 acgcaggtgaggcatatgcgggatccgaagtcgtacaaatttacattgctgcgactgaat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 52402 acgcaggtgaggcatatgcgggatccgaagtcgtacaaatttacattgctgcgactgaat 52461
Query: 421 catctttttctagggcagtcaaagagttgaagggattcaagaaaattttgcttcaacctg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 52462 catctttttctagggcagtcaaagagttgaagggattcaagaaaattttgcttcaacctg 52521
Query: 481 ggcaaaacgaaacagtcaaagttgatttaatcttgaaggattctatttccttcttcgatg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 52522 ggcaaaacgaaacagtcaaagttgatttaatcttgaaggattctatttccttcttcgatg 52581
Query: 541 aagaagtcggtaagtggtgttcagaagctggtcagtacaaagtcttggtaggcacatctt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 52582 aagaagtcggtaagtggtgttcagaagctggtcagtacaaagtcttggtaggcacatctt 52641
Query: 601 cagatgacattgtgctgagtgaatctttcgacgtgaagaaaacctcgtattggacaggtt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 52642 cagatgacattgtgctgagtgaatctttcgacgtgaagaaaacctcgtattggacaggtt 52701
Query: 661 tgtagttggccaatacgcttcacttgcaacatgttttactgtccacatttataaagtatc 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 52702 tgtagttggccaatacgcttcacttgcaacatgttttactgtccacatttataaagtatc 52761
Query: 721 tagatgtcttttatgtcgtatgatttttagtaaagaaatagaataatttccagctttgaa 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 52762 tagatgtcttttatgtcgtatgatttttagtaaagaaatagaataatttccagctttgaa 52821
Query: 781 ttctgatgatcgcaataaaaccttggacgattggctataataactgcaatatgattagtt 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 52822 ttctgatgatcgcaataaaaccttggacgattggctataataactgcaatatgattagtt 52881
Query: 841 ggctattcctctcctactacttatacgtt 869
|||||||||||||||||||||||||||||
Sbjct: 52882 ggctattcctctcctactacttatacgtt 52910
>3x_Contig63
Length = 856
Score = 1157 bits (583), Expect = 0.0
Identities = 695/731 (95%), Gaps = 1/731 (0%)
Strand = Plus / Minus
Query: 48 gcttggtacggaggtaatgagttgggcaatgctattgctgatgtcttgtatggtgacgtt 107
|||||||||||||||||||| |||||||||||||||| ||||||||||| || ||||||
Sbjct: 815 gcttggtacggaggtaatgaactgggcaatgctattgccgatgtcttgtacggggacgtt 756
Query: 108 attccaagtggtaaattatctctctcatggccaataaaccttgaagataacccaacttat 167
||||| |||||||||||||||| ||||||||| |||| |||||||||||||||||||||
Sbjct: 755 gttccaggtggtaaattatctctgtcatggccattaaaacttgaagataacccaacttat 696
Query: 168 ttgaacttcaagactgaatttggcagagttctctacggtgaggatattttcattggatac 227
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 695 ttgaacttcaagactgaatttggcagagttctctacggtgaggatattttcattggatac 636
Query: 228 agattctatgagaagttgcaaagaagagttgcattccccttcggttacgggttatcttat 287
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 635 agattttatgagaagttgcaaagaagagttgcattccccttcggttacgggttatcttat 576
Query: 288 actgaatttgctttatctaatctacaagtacaaacggatgaggaggttatctctgtttct 347
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 575 actgaatttgctttatctcatctacaagtacaaacggatgaggaggttatctctgtttct 516
Query: 348 gttaatgtaaagaacgcaggtgaggcatatgcggg-atccgaagtcgtacaaatttacat 406
||||||||||||||| | ||||||| ||||||||| ||||||||||||||||||||||||
Sbjct: 515 gttaatgtaaagaacacgggtgaggaatatgcggggatccgaagtcgtacaaatttacat 456
Query: 407 tgctgcgactgaatcatctttttctagggcagtcaaagagttgaagggattcaagaaaat 466
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 tgctgcgactgaatcatctgtttctagggcagtcaaagagttgaagggattcaagaaaat 396
Query: 467 tttgcttcaacctgggcaaaacgaaacagtcaaagttgatttaatcttgaaggattctat 526
||| ||||||||||||||||| |||||||||||| ||||||||||||||||||| |||||
Sbjct: 395 tttacttcaacctgggcaaaatgaaacagtcaaaattgatttaatcttgaaggactctat 336
Query: 527 ttccttcttcgatgaagaagtcggtaagtggtgttcagaagctggtcagtacaaagtctt 586
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 ttccttctttgatgaagaagtcggtaagtggtgttcagaagctggtcagtacaaagtctt 276
Query: 587 ggtaggcacatcttcagatgacattgtgctgagtgaatctttcgacgtgaagaaaacctc 646
||||||||||||||| |||| ||||||||||||||||| |||||||||||||||||||||
Sbjct: 275 ggtaggcacatcttccgatggcattgtgctgagtgaatttttcgacgtgaagaaaacctc 216
Query: 647 gtattggacaggtttgtagttggccaatacgcttcacttgcaacatgttttactgtccac 706
||||||||||||||||||| ||||| ||| |||||||||||||||||||||| ||||| |
Sbjct: 215 gtattggacaggtttgtagctggccgatatgcttcacttgcaacatgttttaatgtccgc 156
Query: 707 atttataaagtatctagatgtcttttatgtcgtatgatttttagtaaagaaatagaataa 766
|||||||| |||||||||||||||||||||| ||||||| || | |||||||||||||||
Sbjct: 155 atttataatgtatctagatgtcttttatgtcttatgattgttggcaaagaaatagaataa 96
Query: 767 tttccagcttt 777
|| ||||||||
Sbjct: 95 ttcccagcttt 85
>3x_Contig33
Length = 834
Score = 540 bits (272), Expect = e-153
Identities = 492/558 (88%), Gaps = 8/558 (1%)
Strand = Plus / Minus
Query: 268 tcggttacgggttatcttatactgaatttgctttatctaatctacaagtacaaacggatg 327
|||||||||||| || ||| || ||||||||||||| |||||| ||||| |||| |||
Sbjct: 714 tcggttacgggtcattttacacagaatttgctttatttaatctgcaagttcaaataaatg 655
Query: 328 aggaggttatctctgtttctgttaatgtaaagaacgcaggtgaggcatatgcgggatccg 387
| || |||||||||||||||||| |||| |||||| |||||||| |||||||||||| |
Sbjct: 654 aagaagttatctctgtttctgttgatgttaagaacacaggtgagaaatatgcgggatctg 595
Query: 388 aagtcgtacaaattt-acattgctgcgactgaatcatctttttctagggcagtcaaagag 446
||||||||||| ||| | |||||||| |||||||||||| ||||||||||||| || |||
Sbjct: 594 aagtcgtacaagttttatattgctgctactgaatcatctgtttctagggcagtgaaggag 535
Query: 447 ttgaagggattcaagaaaattttgcttcaacctgggcaaaacgaaacagtcaaag-ttga 505
|||||||||||||||||| |||| |||||||| ||||||| |||||||| ||||| ||||
Sbjct: 534 ttgaagggattcaagaaagttttacttcaacccgggcaaaccgaaacag-caaagattga 476
Query: 506 tttaatcttgaaggattctatttccttcttcgatgaagaagtcggtaagtggtgttcaga 565
|||| |||||||||| ||| | ||||||||||||||||||||||||||||||||||||||
Sbjct: 475 tttagtcttgaaggactctgtctccttcttcgatgaagaagtcggtaagtggtgttcaga 416
Query: 566 agctggtcagtaca-aagtcttggtaggcacatcttcagatgacattgtgctgagtgaat 624
|||||||||||||| ||||||||||||| || ||||| ||||||||||| ||||||||||
Sbjct: 415 agctggtcagtacacaagtcttggtaggtacttcttccgatgacattgtcctgagtgaat 356
Query: 625 ctttcgacgtgaagaaaacctcgtattggacaggtttgtagttggccaatacgcttcact 684
||||||||||| |||||||||| || ||| |||||||||||||| ||||||| || | |
Sbjct: 355 ctttcgacgtggagaaaacctcttactggtcaggtttgtagttgagcaatacggttaatt 296
Query: 685 tgcaacatgttttactgtccacatttataaagtatctagatgtcttttatgtcgtatgat 744
||||||||| ||||||||||||||||| ||| |||||||||||||||||| ||||||
Sbjct: 295 acaaacatgtttcactgtccacatttataatgtaactagatgtcttttatgtcttatgat 236
Query: 745 ttttagtaaagaaatagaataatttccagctttgaattctgatgatcgcaataaaacctt 804
|||||||||||||||||||||| |||| |||| | ||| ||||||| |||||| |||
Sbjct: 235 ttttagtaaagaaatagaataacttcc-tcttttagttc---tgatcgcgataaaaactt 180
Query: 805 ggacgattggctataata 822
||||||||||||||||||
Sbjct: 179 ggacgattggctataata 162
>3x_Contig1015
Length = 4152
Score = 153 bits (77), Expect = 6e-37
Identities = 137/155 (88%), Gaps = 2/155 (1%)
Strand = Plus / Plus
Query: 1 tcctgtcgagttcccatgattacaaaawgctaaagctctcattcaatgcttggtacggag 60
|||||||||||||||||| |||||||| ||||| ||||| ||||| |||||||||||||
Sbjct: 3999 tcctgtcgagttcccatggttacaaaaagctaatgctctggttcaa-gcttggtacggag 4057
Query: 61 gtaatgagttgggcaatgctattgctgatgtcttgtatggtgacgttattcc-aagtggt 119
| |||||| |||| |||||||||||||| |||||||||||||| ||| |||| || |||
Sbjct: 4058 gcaatgagctgggtaatgctattgctgacgtcttgtatggtgatgttgttccaaaatggg 4117
Query: 120 aaattatctctctcatggccaataaaccttgaaga 154
||||||||||||||||||| | |||| ||||||||
Sbjct: 4118 aaattatctctctcatggctattaaagcttgaaga 4152
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6485
Number of Sequences: 1807
Number of extensions: 6485
Number of successful extensions: 51
Number of sequences better than 1.0e-20: 4
length of query: 869
length of database: 10,358,551
effective HSP length: 16
effective length of query: 853
effective length of database: 10,329,639
effective search space: 8811182067
effective search space used: 8811182067
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)